CDS

Accession Number TCMCG017C26581
gbkey CDS
Protein Id OMO69358.1
Location join(57266..57430,57544..57629,58138..58386,58471..58596,58715..58799,58914..59024,59400..59493,59657..59919,60079..60186,60277..60398,60667..60886,61030..61233,61579..61683)
GeneID InterPro:IPR001357
Organism Corchorus olitorius
locus_tag COLO4_29105

Protein

Length 645aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01020233.1
Definition hypothetical protein COLO4_29105 [Corchorus olitorius]
Locus_tag COLO4_29105

EGGNOG-MAPPER Annotation

COG_category A
Description Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14843        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000463        [VIEW IN EMBL-EBI]
GO:0000470        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0030686        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042273        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070545        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090069        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000232        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGTCAACATTTCTGAAACCGGATCCTATATTAGCTTAAACCCTAGTATTTTTAGTTACCCCCTTTCTGCTCCCTTCTCTGTTTCTTCGCCTTCGCAGCTTCTTACTTCTCTTAACAACTATGGGGAAGCCGAAACACTATCGACCTCCGGCAAGTTCTCTGGAAAGAAGAAGGAAGGAAATGCTGCGAGATATGTGACCAGGTCACAAGCCCTAAAAATCCTTCAAGTTAGCCTCAAAGATTTCAGGAAATTATGTATTCACAAAGGAGTATTTCCAAGGGAGCCAAAGAAGAAAGTGAATGGAAACCATCATACTTACTATCACTTGAAGGATGTTATGTACATTCTTCACGACCCATTACTTGAGAAGTTTAGAGAAATGAGGGCATATCAAAAAAAGATAAAGAAAGCGAAGGCAAAAAAGAATGATGAGTTAGCAAAGCTTCTTCTATCACGTGCACCTTCTTACAAGCTTGATAGGGTCATCCGGGATAGGTATCCAACGTTTATTGATGCACTTAGAGACTTGGATGACCCTCTTACAATGGTGCACCTGTTTGCAATGTTGCCTGCCATTGATAGGCTGAAAATTGAAGTGAAGCGCATCCATAATTGTCGAAGGTTGTGTCATGAATGGCAAGCCTATATTTCTCGTACTCATAAATTAAGGAAAGCTTTTGTGGCTGTAAAGGGTATATATTATCAGGCTGAGGTTGAGGGTCAAAAAATCACATGGTTAGCACCACATGCACGACAGCAAGTATTGACTGATGATGTTGACTTCAATGTCATGTTAACATTTTTGGAATTCTATGAGGCACTTTTTGGCTTTGTCAATTTTCAACTCTATCACTCTATAAATGTGAAGTATCCTCCTATTCTTGATCCTCGGTTGGAAGCTCTTGCAGCAGATCTCTATGCATTGTCGCGTTATTTTGATGCAAATTATAGAGCCTCTGTACAAGAACCTCAAGTTGCCGGTTCATCTAGATCAGTGCAAGAGCAAGAGGAGTCTGACTTGAGACTTGCTCAACTTCAGCATCAACTCCCTGCAAATGAGCCTGGTGCACTGATGCACCTTGTTCAAAATGCTGATAGTGAAATTGAAGAAGATGAAGCTACAAGGGAGTGCAAAAATCTTTTTCAAAATAAGAAGTTTTTCTTGAGTCGGGAGGTTCCGAGAGAGTCTTTGCTCTTTGTCATTCCTGCTTTTGGAGGTATTGTTTCTTGGGAAGGAGAGGGAGCACCATTTGCAGAAGCTGATGATAGCATTACTCATCAGATTGTTGACAGACCAACCCAGGGTCATGTATACCTTTCAAGAGAATACATTCAACCGCAATGGATCTATGACTGTGTAAATGCACGAATAATCTTGCCAACTGAGCCATATTTGGTTGGGAGGGATCCACCTCCACATCTGTCACCTTTTGTTGATGATGAGGCTGAGGGTTATGTTCCTGATTATGCCAAGACCATTAGACAACTACAGGCTGCTGCGAAAAGTGATGTTCAACCTTTGCCTGGTGTGGGAAATGATGATTTGGATAACCCTCAAGCTATGTTGGCTGAAGGGTTTATCAATAGAACAGAGGCTATGGAAGCTGCTGAGAAGAAGCGACAGATGATGCTTCTTGAGAAGCAGTATCATGATGAACTGAAAATGGAACTTCAGGGTGTCTCAAGCATAAATAAGCAGACCTCTGCTGAGGATATAGAATCTAAAGAAGAATCTCTTCCTGATGTTCAACAAAGTGCCATGGATTCTGAGGATCCATCAACACTCATGATGTCACGTAAAAAGAGGGGGCTTGCTAAGGCTATTGAGATGGGCAAGCAACGAAAGAAGGATCGTGTTGAAAAACTCAAGGAGCGGAAGAGGAATATTGAAGCCGCAACGAAATCTGAGAAGAAGAGTAATAGAAAAGCTTAA
Protein:  
MAVNISETGSYISLNPSIFSYPLSAPFSVSSPSQLLTSLNNYGEAETLSTSGKFSGKKKEGNAARYVTRSQALKILQVSLKDFRKLCIHKGVFPREPKKKVNGNHHTYYHLKDVMYILHDPLLEKFREMRAYQKKIKKAKAKKNDELAKLLLSRAPSYKLDRVIRDRYPTFIDALRDLDDPLTMVHLFAMLPAIDRLKIEVKRIHNCRRLCHEWQAYISRTHKLRKAFVAVKGIYYQAEVEGQKITWLAPHARQQVLTDDVDFNVMLTFLEFYEALFGFVNFQLYHSINVKYPPILDPRLEALAADLYALSRYFDANYRASVQEPQVAGSSRSVQEQEESDLRLAQLQHQLPANEPGALMHLVQNADSEIEEDEATRECKNLFQNKKFFLSREVPRESLLFVIPAFGGIVSWEGEGAPFAEADDSITHQIVDRPTQGHVYLSREYIQPQWIYDCVNARIILPTEPYLVGRDPPPHLSPFVDDEAEGYVPDYAKTIRQLQAAAKSDVQPLPGVGNDDLDNPQAMLAEGFINRTEAMEAAEKKRQMMLLEKQYHDELKMELQGVSSINKQTSAEDIESKEESLPDVQQSAMDSEDPSTLMMSRKKRGLAKAIEMGKQRKKDRVEKLKERKRNIEAATKSEKKSNRKA